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TERN Species Determination

Metadata

URI
https://w3id.org/tern/ontologies/sd/
Imports
https://raw.githubusercontent.com/AGLDWG/datatype-ont/master/rdf/datatype.rdf
Ontology RDF
RDF (turtle)

Table of Contents

  1. Overview
  2. Classes
  3. Properties
  4. Namespaces
  5. Legend

Overview

An overview of the TERN Species Determination.

TERN Species Determination diagram.
Figure 1: TERN Species Determination overview.

Classes &uparrow

Identification c

URI http://rs.tdwg.org/dwc/terms/Identification
Is Defined By http://rs.tdwg.org/dwc/terms/
Description

A taxonomic determination (e.g., the assignment to a taxon).

Example
                      A subspecies determination of an organism.
                    
Sub-classes tern-sd:StateIdentification c

Material Sample c

URI http://rs.tdwg.org/dwc/terms/MaterialSample
Is Defined By http://rs.tdwg.org/dwc/terms/
Description

A physical result of a sampling (or subsampling) event. In biological collections, the material sample is typically collected, and either preserved or destructively processed.

Example
                      A whole organism preserved in a collection. A part of an organism isolated for some purpose. A soil sample. A marine microbial sample.
                    

Taxon c

URI http://rs.tdwg.org/dwc/terms/Taxon
Is Defined By http://rs.tdwg.org/dwc/terms/
Description

A group of organisms (sensu http://purl.obolibrary.org/obo/OBI_0100026) considered by taxonomists to form a homogeneous unit.

Example
                      The genus Truncorotaloides as published by Brönnimann et al. in 1953 in the Journal of Paleontology Vol. 27(6) p. 817-820.
                    
Sub-classes tern-sd:NationalTaxon c
tern-sd:StateTaxon c

Field taxon name c

URI https://w3id.org/tern/ontologies/sd/FieldTaxonName
Description

A taxon (species) name determined in the field.

Super-classes data:Text c
Restrictions data:value exactly 1
tern-sd:identification max 1 tern-sd:StateIdentification c

National taxon c

URI https://w3id.org/tern/ontologies/sd/NationalTaxon
Description

A taxon definition by the national herbarium.

Super-classes dwc:Taxon c
Restrictions dwc:scientificName exactly 1 xsd:string c
dwc:taxonConceptID exactly 1
rdfs:comment max 1 xsd:string c
dwc:scientificNameID exactly 1
rdfs:label exactly 1 xsd:string c

State identification c

URI https://w3id.org/tern/ontologies/sd/StateIdentification
Description

An identification performed by the state herbarium.

Super-classes dwc:Identification c
Restrictions dwc:identificationRemarks max 1
tern-sd:stateTaxon exactly 1 tern-sd:StateTaxon c
dwc:identifiedBy max 1
tern-sd:identifiedSample exactly 1 dwc:MaterialSample c
dwc:identificationID max 1
tern-sd:nationalTaxon max 1 tern-sd:NationalTaxon c
dwc:dateIdentified max 1
rdfs:comment max 1
rdfs:label exactly 1

State taxon c

URI https://w3id.org/tern/ontologies/sd/StateTaxon
Description

A taxon definition by the state herbarium.

Super-classes dwc:Taxon c
Restrictions tern-sd:nationalTaxon max 1 tern-sd:NationalTaxon c
dwc:scientificName exactly 1 xsd:string c
dwc:phylum max 1 xsd:string c
dwc:scientificNameAuthorship max 1 xsd:string c
rdfs:label exactly 1 xsd:string c
dwc:infraspecificEpithet max 1 xsd:string c
dwc:family max 1 xsd:string c
rdfs:comment max 1 xsd:string c
tern-sd:identification exactly 1 tern-sd:StateIdentification c
dwc:order max 1 xsd:string c
dwc:kingdom max 1 xsd:string c
dwc:class max 1 xsd:string c
dwc:genus max 1 xsd:string c
dwc:specificEpithet max 1 xsd:string c
dwc:taxonRemarks max 1

Properties &uparrow

class p

URI http://rs.tdwg.org/dwc/terms/class
Is Defined By http://rs.tdwg.org/dwc/terms/
Description The full scientific name of the class in which the taxon is classified.

dateIdentified p

URI http://rs.tdwg.org/dwc/terms/dateIdentified
Is Defined By http://rs.tdwg.org/dwc/terms/
Description The date on which the subject was identified as representing the Taxon.
Example
                      2009-02-20T08:40Z (20 February 2009 8:40am UTC).
                    

family p

URI http://rs.tdwg.org/dwc/terms/family
Is Defined By http://rs.tdwg.org/dwc/terms/
Description The full scientific name of the family in which the taxon is classified.
Example
                      Felidae, Monocleaceae
                    

genus p

URI http://rs.tdwg.org/dwc/terms/genus
Is Defined By http://rs.tdwg.org/dwc/terms/
Description The full scientific name of the genus in which the taxon is classified.
Example
                      Puma, Monoclea
                    

identification ID p

URI http://rs.tdwg.org/dwc/terms/identificationID
Is Defined By http://rs.tdwg.org/dwc/terms/
Description An identifier for the Identification (the body of information associated with the assignment of a scientific name). May be a global unique identifier or an identifier specific to the data set.
Example
                      9992
                    

identification remarks p

URI http://rs.tdwg.org/dwc/terms/identificationRemarks
Is Defined By http://rs.tdwg.org/dwc/terms/
Description Comments or notes about the Identification.
Example
                      Distinguished between Anthus correndera and Anthus hellmayri based on the comparative lengths of the uñas.
                    

identified by p

URI http://rs.tdwg.org/dwc/terms/identifiedBy
Is Defined By http://rs.tdwg.org/dwc/terms/
Description A list (concatenated and separated) of names of people, groups, or organizations who assigned the Taxon to the subject.
Example
                      James L. Patton, Theodore Pappenfuss | Robert Macey
                    

infraspecific epithet p

URI http://rs.tdwg.org/dwc/terms/infraspecificEpithet
Is Defined By http://rs.tdwg.org/dwc/terms/
Description The name of the lowest or terminal infraspecific epithet of the scientificName, excluding any rank designation.
Example
                      	concolor, oxyadenia, sayi
                    

kingdom p

URI http://rs.tdwg.org/dwc/terms/kingdom
Is Defined By http://rs.tdwg.org/dwc/terms/
Description The full scientific name of the kingdom in which the taxon is classified.
Example
                      Animalia, Archaea, Bacteria, Chromista, Fungi, Plantae, Protozoa, Viruses
                    

material sample ID p

URI http://rs.tdwg.org/dwc/terms/materialSampleID
Is Defined By http://rs.tdwg.org/dwc/terms/
Description An identifier for the MaterialSample (as opposed to a particular digital record of the material sample). In the absence of a persistent global unique identifier, construct one from a combination of identifiers in the record that will most closely make the materialSampleID globally unique.
Example
                      06809dc5-f143-459a-be1a-6f03e63fc083
                    

name according to p

URI http://rs.tdwg.org/dwc/terms/nameAccordingTo
Is Defined By http://rs.tdwg.org/dwc/terms/
Description The reference to the source in which the specific taxon concept circumscription is defined or implied - traditionally signified by the Latin "sensu" or "sec." (from secundum, meaning "according to"). For taxa that result from identifications, a reference to the keys, monographs, experts and other sources should be given.
Example
                      Werner Greuter 2008
                    

order p

URI http://rs.tdwg.org/dwc/terms/order
Is Defined By http://rs.tdwg.org/dwc/terms/
Description The full scientific name of the order in which the taxon is classified.
Example
                      Carnivora, Monocleales
                    

phylum p

URI http://rs.tdwg.org/dwc/terms/phylum
Is Defined By http://rs.tdwg.org/dwc/terms/
Description The full scientific name of the phylum or division in which the taxon is classified.
Example
                      Chordata (phylum). Bryophyta (division).
                    

scientific name p

URI http://rs.tdwg.org/dwc/terms/scientificName
Is Defined By http://rs.tdwg.org/dwc/terms/
Description The full scientific name, with authorship and date information if known. When forming part of an Identification, this should be the name in lowest level taxonomic rank that can be determined. This term should not contain identification qualifications, which should instead be supplied in the IdentificationQualifier term.

scientific name authorship p

URI http://rs.tdwg.org/dwc/terms/scientificNameAuthorship
Is Defined By http://rs.tdwg.org/dwc/terms/
Description The authorship information for the scientificName formatted according to the conventions of the applicable nomenclaturalCode.
Example
                      (Torr.) J.T. Howell, (Martinovský) Tzvelev, (Györfi, 1952)
                    

scientific name ID p

URI http://rs.tdwg.org/dwc/terms/scientificNameID
Is Defined By http://rs.tdwg.org/dwc/terms/
Description An identifier for the nomenclatural (not taxonomic) details of a scientific name.
Example
                      urn:lsid:ipni.org:names:37829-1:1.3
                    

specific epithet p

URI http://rs.tdwg.org/dwc/terms/specificEpithet
Is Defined By http://rs.tdwg.org/dwc/terms/
Description The name of the first or species epithet of the scientificName.
Example
                      concolor, gottschei
                    

taxon concept ID p

URI http://rs.tdwg.org/dwc/terms/taxonConceptID
Is Defined By http://rs.tdwg.org/dwc/terms/
Description An identifier for the taxonomic concept to which the record refers - not for the nomenclatural details of a taxon.
Example
                      8fa58e08-08de-4ac1-b69c-1235340b7001
                    

taxon remarks p

URI http://rs.tdwg.org/dwc/terms/taxonRemarks
Is Defined By http://rs.tdwg.org/dwc/terms/
Description Comments or notes about the taxon or name.
Example
                      this name is a misspelling in common use
                    

identification p

URI https://w3id.org/tern/ontologies/sd/identification

identified sample p

URI https://w3id.org/tern/ontologies/sd/identifiedSample
Description Link an Identification to a Sample.

national taxon p

URI https://w3id.org/tern/ontologies/sd/nationalTaxon

state taxon p

URI https://w3id.org/tern/ontologies/sd/stateTaxon
Description Link an Identification or a Taxon to a State Taxon.

Named Individuals &uparrow

Namespaces &uparrow

data
http://linked.data.gov.au/def/datatype/
dwc
http://rs.tdwg.org/dwc/terms/
onm
https://w3id.org/tern/ontologies/onm/
owl
http://www.w3.org/2002/07/owl#
prov
http://www.w3.org/ns/prov#
rdf
http://www.w3.org/1999/02/22-rdf-syntax-ns#
rdfs
http://www.w3.org/2000/01/rdf-schema#
sdo
https://schema.org/
skos
http://www.w3.org/2004/02/skos/core#
tern-sd
https://w3id.org/tern/ontologies/sd/
xsd
http://www.w3.org/2001/XMLSchema#

Legend

c Classes
op Object Properties
fp Functional Properties
dp Data Properties
dp Annotation Properties
p Properties
ni Named Individuals